Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Mmp8O70138 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC16.47■□□□□ 0.23
Mmp8O70138 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.47■□□□□ 0.23
Mmp8O70138 Gm9924-202ENSMUST00000192760 2311 ntBASIC16.47■□□□□ 0.23
Mmp8O70138 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Mmp8O70138 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Mmp8O70138 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Mmp8O70138 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Gm12928-201ENSMUST00000117115 573 ntBASIC16.47■□□□□ 0.23
Mmp8O70138 Gm11918-201ENSMUST00000121660 179 ntBASIC16.47■□□□□ 0.23
Mmp8O70138 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.47■□□□□ 0.23
Mmp8O70138 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.47■□□□□ 0.23
Mmp8O70138 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.47■□□□□ 0.23
Mmp8O70138 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.47■□□□□ 0.23
Mmp8O70138 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Mmp8O70138 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC16.47■□□□□ 0.23
Mmp8O70138 Grk6-205ENSMUST00000224653 2976 ntBASIC16.47■□□□□ 0.23
Mmp8O70138 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Mmp8O70138 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 AC096628.2-201ENSMUST00000225443 1413 ntBASIC16.46■□□□□ 0.23
Mmp8O70138 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Mmp8O70138 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Gm7063-201ENSMUST00000186840 981 ntBASIC16.46■□□□□ 0.23
Mmp8O70138 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.46■□□□□ 0.23
Mmp8O70138 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.46■□□□□ 0.23
Mmp8O70138 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.46■□□□□ 0.23
Mmp8O70138 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.46■□□□□ 0.23
Mmp8O70138 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Mmp8O70138 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.46■□□□□ 0.23
Mmp8O70138 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp8O70138 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp8O70138 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp8O70138 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp8O70138 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Mmp8O70138 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Mmp8O70138 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Mmp8O70138 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Mmp8O70138 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.45■□□□□ 0.22
Mmp8O70138 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Gm45841-201ENSMUST00000207700 164 ntBASIC16.45■□□□□ 0.22
Mmp8O70138 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.45■□□□□ 0.22
Mmp8O70138 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC16.45■□□□□ 0.22
Mmp8O70138 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Mmp8O70138 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms