Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm22323-201ENSMUST00000103832 109 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm6023-201ENSMUST00000118217 606 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm7809-201ENSMUST00000153199 742 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.84□□□□□ -0.03
Trdmt1O55055 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trdmt1O55055 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trdmt1O55055 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.84□□□□□ -0.03
Trdmt1O55055 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trdmt1O55055 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trdmt1O55055 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trdmt1O55055 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Gm15370-201ENSMUST00000117158 253 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 Gm13297-201ENSMUST00000120205 934 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 Gm19163-201ENSMUST00000223313 780 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 CT485787.1-201ENSMUST00000225617 968 ntBASIC14.83□□□□□ -0.04
Trdmt1O55055 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.83□□□□□ -0.04
Trdmt1O55055 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trdmt1O55055 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.82□□□□□ -0.04
Trdmt1O55055 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.82□□□□□ -0.04
Trdmt1O55055 Gm12363-201ENSMUST00000122250 668 ntBASIC14.82□□□□□ -0.04
Trdmt1O55055 Gm26083-201ENSMUST00000157904 193 ntBASIC14.82□□□□□ -0.04
Trdmt1O55055 Gm2991-201ENSMUST00000173338 480 ntBASIC14.82□□□□□ -0.04
Trdmt1O55055 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Gm7046-201ENSMUST00000221351 977 ntBASIC14.82□□□□□ -0.04
Trdmt1O55055 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.82□□□□□ -0.04
Trdmt1O55055 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.82□□□□□ -0.04
Trdmt1O55055 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
Trdmt1O55055 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trdmt1O55055 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.82□□□□□ -0.04
Trdmt1O55055 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trdmt1O55055 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trdmt1O55055 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.81□□□□□ -0.04
Trdmt1O55055 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms