Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Rnf13O54965 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.28□□□□□ -0.44
Rnf13O54965 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Rnf13O54965 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Rnf13O54965 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Rnf13O54965 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Rnf13O54965 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.27□□□□□ -0.44
Rnf13O54965 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rnf13O54965 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm5566-201ENSMUST00000116118 459 ntBASIC12.27□□□□□ -0.45
Rnf13O54965 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Rnf13O54965 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm9719-201ENSMUST00000162765 543 ntBASIC12.27□□□□□ -0.45
Rnf13O54965 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rnf13O54965 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.27□□□□□ -0.45
Rnf13O54965 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.27□□□□□ -0.45
Rnf13O54965 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.27□□□□□ -0.45
Rnf13O54965 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rnf13O54965 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Rnf13O54965 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.27□□□□□ -0.45
Rnf13O54965 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Rnf13O54965 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Rnf13O54965 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rnf13O54965 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Rnf13O54965 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Gm18766-201ENSMUST00000189811 808 ntBASIC12.26□□□□□ -0.45
Rnf13O54965 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Gm6916-202ENSMUST00000205523 195 ntBASIC12.26□□□□□ -0.45
Rnf13O54965 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf13O54965 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.26□□□□□ -0.45
Rnf13O54965 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.26□□□□□ -0.45
Rnf13O54965 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rnf13O54965 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rnf13O54965 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rnf13O54965 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.25□□□□□ -0.45
Rnf13O54965 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rnf13O54965 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.25□□□□□ -0.45
Rnf13O54965 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.25□□□□□ -0.45
Rnf13O54965 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rnf13O54965 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms