Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn5O54942 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC14.03□□□□□ -0.16
Cldn5O54942 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Itm2b-204ENSMUST00000228637 783 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 AC114008.2-201ENSMUST00000227699 1347 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.03□□□□□ -0.16
Cldn5O54942 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.03□□□□□ -0.16
Cldn5O54942 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cldn5O54942 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cldn5O54942 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Cldn5O54942 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.02□□□□□ -0.16
Cldn5O54942 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cldn5O54942 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cldn5O54942 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.02□□□□□ -0.17
Cldn5O54942 Gm11803-201ENSMUST00000119966 444 ntBASIC14.02□□□□□ -0.17
Cldn5O54942 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.02□□□□□ -0.17
Cldn5O54942 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.02□□□□□ -0.17
Cldn5O54942 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn5O54942 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cldn5O54942 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn5O54942 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.02□□□□□ -0.17
Cldn5O54942 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Cldn5O54942 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cldn5O54942 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn5O54942 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.01□□□□□ -0.17
Cldn5O54942 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.01□□□□□ -0.17
Cldn5O54942 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Cldn5O54942 Proscos-202ENSMUST00000178990 666 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.01□□□□□ -0.17
Cldn5O54942 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cldn5O54942 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cldn5O54942 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Cldn5O54942 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cldn5O54942 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms