Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
DffaO54786 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.18□□□□□ -0.14
DffaO54786 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.18□□□□□ -0.14
DffaO54786 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Gm27838-201ENSMUST00000184829 128 ntBASIC14.18□□□□□ -0.14
DffaO54786 Mir7023-201ENSMUST00000185093 64 ntBASIC14.18□□□□□ -0.14
DffaO54786 Gm20949-201ENSMUST00000206478 952 ntBASIC14.18□□□□□ -0.14
DffaO54786 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DffaO54786 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
DffaO54786 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DffaO54786 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
DffaO54786 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
DffaO54786 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
DffaO54786 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DffaO54786 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.17□□□□□ -0.14
DffaO54786 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
DffaO54786 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.17□□□□□ -0.14
DffaO54786 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.17□□□□□ -0.14
DffaO54786 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.17□□□□□ -0.14
DffaO54786 Gm15770-201ENSMUST00000117498 584 ntBASIC14.17□□□□□ -0.14
DffaO54786 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.17□□□□□ -0.14
DffaO54786 Gm14719-201ENSMUST00000121891 340 ntBASIC14.17□□□□□ -0.14
DffaO54786 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.17□□□□□ -0.14
DffaO54786 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.17□□□□□ -0.14
DffaO54786 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC14.17□□□□□ -0.14
DffaO54786 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.17□□□□□ -0.14
DffaO54786 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.17□□□□□ -0.14
DffaO54786 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
DffaO54786 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.17□□□□□ -0.14
DffaO54786 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
DffaO54786 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
DffaO54786 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
DffaO54786 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.16□□□□□ -0.14
DffaO54786 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
DffaO54786 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
DffaO54786 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.16□□□□□ -0.14
DffaO54786 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.16□□□□□ -0.14
DffaO54786 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.16□□□□□ -0.14
DffaO54786 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
DffaO54786 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
DffaO54786 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
DffaO54786 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffaO54786 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffaO54786 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffaO54786 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffaO54786 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffaO54786 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
DffaO54786 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.15□□□□□ -0.14
DffaO54786 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms