Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm2O35900 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.04□□□□□ -0.48
Lsm2O35900 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.04□□□□□ -0.48
Lsm2O35900 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm2O35900 Gm17971-201ENSMUST00000190239 806 ntBASIC12.04□□□□□ -0.48
Lsm2O35900 Gm18057-201ENSMUST00000208220 503 ntBASIC12.04□□□□□ -0.48
Lsm2O35900 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.04□□□□□ -0.48
Lsm2O35900 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lsm2O35900 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm2O35900 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm2O35900 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm2O35900 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Gm13015-201ENSMUST00000118674 204 ntBASIC12.03□□□□□ -0.48
Lsm2O35900 Gm11025-201ENSMUST00000140773 466 ntBASIC12.03□□□□□ -0.48
Lsm2O35900 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm2O35900 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.03□□□□□ -0.48
Lsm2O35900 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm2O35900 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.03□□□□□ -0.48
Lsm2O35900 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.03□□□□□ -0.48
Lsm2O35900 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.03□□□□□ -0.48
Lsm2O35900 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm2O35900 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Lsm2O35900 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Lsm2O35900 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
Lsm2O35900 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm2O35900 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.02□□□□□ -0.48
Lsm2O35900 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.02□□□□□ -0.48
Lsm2O35900 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm2O35900 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.02□□□□□ -0.49
Lsm2O35900 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lsm2O35900 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.02□□□□□ -0.49
Lsm2O35900 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Mir874-201ENSMUST00000104769 76 ntBASIC12.02□□□□□ -0.49
Lsm2O35900 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
Lsm2O35900 Gm1401-201ENSMUST00000122048 772 ntBASIC12.02□□□□□ -0.49
Lsm2O35900 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm2O35900 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm2O35900 Mir7221-201ENSMUST00000184009 72 ntBASIC12.02□□□□□ -0.49
Lsm2O35900 Gm28659-201ENSMUST00000188013 759 ntBASIC12.02□□□□□ -0.49
Lsm2O35900 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Lsm2O35900 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.02□□□□□ -0.49
Lsm2O35900 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms