Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.34□□□□□ -0.27
Slc1a6O35544 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.34□□□□□ -0.27
Slc1a6O35544 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc1a6O35544 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.34□□□□□ -0.27
Slc1a6O35544 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Slc1a6O35544 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Slc1a6O35544 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Slc1a6O35544 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc1a6O35544 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Slc1a6O35544 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm21470-201ENSMUST00000187680 696 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.33□□□□□ -0.28
Slc1a6O35544 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Slc1a6O35544 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.33□□□□□ -0.28
Slc1a6O35544 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Slc1a6O35544 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.32□□□□□ -0.28
Slc1a6O35544 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc1a6O35544 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.32□□□□□ -0.28
Slc1a6O35544 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.32□□□□□ -0.28
Slc1a6O35544 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Gm27494-201ENSMUST00000184735 189 ntBASIC13.32□□□□□ -0.28
Slc1a6O35544 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.32□□□□□ -0.28
Slc1a6O35544 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Slc1a6O35544 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Slc1a6O35544 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms