Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.8□□□□□ -0.52
Atf6bO35451 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.8□□□□□ -0.52
Atf6bO35451 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Atf6bO35451 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.79□□□□□ -0.52
Atf6bO35451 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC11.79□□□□□ -0.52
Atf6bO35451 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.79□□□□□ -0.52
Atf6bO35451 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Ighv1-51-201ENSMUST00000192903 354 ntBASIC11.79□□□□□ -0.52
Atf6bO35451 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.79□□□□□ -0.52
Atf6bO35451 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Gm9797-201ENSMUST00000052902 613 ntBASIC11.79□□□□□ -0.52
Atf6bO35451 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Atf6bO35451 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Atf6bO35451 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Atf6bO35451 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.78□□□□□ -0.52
Atf6bO35451 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Atf6bO35451 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Atf6bO35451 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Atf6bO35451 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.78□□□□□ -0.52
Atf6bO35451 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.78□□□□□ -0.52
Atf6bO35451 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm29741-201ENSMUST00000192667 421 ntBASIC11.78□□□□□ -0.52
Atf6bO35451 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm6218-201ENSMUST00000219812 628 ntBASIC11.78□□□□□ -0.52
Atf6bO35451 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Atf6bO35451 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.78□□□□□ -0.52
Atf6bO35451 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Atf6bO35451 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.78□□□□□ -0.52
Atf6bO35451 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Atf6bO35451 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6bO35451 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Atf6bO35451 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6bO35451 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.77□□□□□ -0.52
Atf6bO35451 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6bO35451 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Atf6bO35451 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms