Protein–RNA interactions for Protein: O35449

Prrt1, Proline-rich transmembrane protein 1, mousemouse

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt1O35449 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Prrt1O35449 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.43□□□□□ -0.58
Prrt1O35449 Gm10060-201ENSMUST00000212002 111 ntBASIC11.43□□□□□ -0.58
Prrt1O35449 CT025555.1-201ENSMUST00000225901 1217 ntBASIC11.43□□□□□ -0.58
Prrt1O35449 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Prrt1O35449 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Prrt1O35449 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Prrt1O35449 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.43□□□□□ -0.58
Prrt1O35449 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Prrt1O35449 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.42□□□□□ -0.58
Prrt1O35449 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Gm45743-201ENSMUST00000212701 2795 ntBASIC11.42□□□□□ -0.58
Prrt1O35449 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.42□□□□□ -0.58
Prrt1O35449 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.42□□□□□ -0.58
Prrt1O35449 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.42□□□□□ -0.58
Prrt1O35449 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.42□□□□□ -0.58
Prrt1O35449 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC11.42□□□□□ -0.58
Prrt1O35449 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.42□□□□□ -0.58
Prrt1O35449 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Prrt1O35449 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC11.41□□□□□ -0.58
Prrt1O35449 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.41□□□□□ -0.58
Prrt1O35449 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC11.41□□□□□ -0.58
Prrt1O35449 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Prrt1O35449 Gm9385-201ENSMUST00000117563 472 ntBASIC11.41□□□□□ -0.58
Prrt1O35449 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
Prrt1O35449 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Prrt1O35449 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.41□□□□□ -0.58
Prrt1O35449 Gm6443-201ENSMUST00000203599 874 ntBASIC11.41□□□□□ -0.58
Prrt1O35449 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Prrt1O35449 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Prrt1O35449 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms