Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Tnfrsf11aO35305 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gm16342-201ENSMUST00000124025 1025 ntBASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Tnfrsf11aO35305 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Gm18018-201ENSMUST00000198273 408 ntBASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Tnfrsf11aO35305 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gm12138-201ENSMUST00000122180 951 ntBASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gm9908-201ENSMUST00000211534 448 ntBASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tnfrsf11aO35305 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms