Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Hdac1O09106 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac1O09106 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac1O09106 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hdac1O09106 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac1O09106 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac1O09106 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Hdac1O09106 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Hdac1O09106 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Hdac1O09106 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Hdac1O09106 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Mir874-201ENSMUST00000104769 76 ntBASIC16.1■□□□□ 0.17
Hdac1O09106 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.1■□□□□ 0.17
Hdac1O09106 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Gm7336-201ENSMUST00000107041 1232 ntBASIC16.1■□□□□ 0.17
Hdac1O09106 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC16.1■□□□□ 0.17
Hdac1O09106 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.1■□□□□ 0.17
Hdac1O09106 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Gm43703-201ENSMUST00000200523 763 ntBASIC16.1■□□□□ 0.17
Hdac1O09106 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.1■□□□□ 0.17
Hdac1O09106 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Hdac1O09106 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Hdac1O09106 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC16.09■□□□□ 0.17
Hdac1O09106 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Hdac1O09106 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Mir449b-201ENSMUST00000104833 80 ntBASIC16.09■□□□□ 0.17
Hdac1O09106 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.09■□□□□ 0.17
Hdac1O09106 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.09■□□□□ 0.17
Hdac1O09106 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.09■□□□□ 0.17
Hdac1O09106 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Hdac1O09106 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Hdac1O09106 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Hdac1O09106 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.09■□□□□ 0.17
Hdac1O09106 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.09■□□□□ 0.17
Hdac1O09106 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Hdac1O09106 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac1O09106 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
Hdac1O09106 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Hdac1O09106 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hdac1O09106 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
Hdac1O09106 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.08■□□□□ 0.16
Hdac1O09106 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Hdac1O09106 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.08■□□□□ 0.16
Hdac1O09106 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.08■□□□□ 0.16
Hdac1O09106 Gm25144-201ENSMUST00000179561 110 ntBASIC16.08■□□□□ 0.16
Hdac1O09106 Gm25352-201ENSMUST00000179815 110 ntBASIC16.08■□□□□ 0.16
Hdac1O09106 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.08■□□□□ 0.16
Hdac1O09106 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC16.08■□□□□ 0.16
Hdac1O09106 Gm7774-201ENSMUST00000200064 533 ntBASIC16.08■□□□□ 0.16
Hdac1O09106 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Hdac1O09106 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Hdac1O09106 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Hdac1O09106 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms