Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Gm15371-201ENSMUST00000117057 784 ntBASIC14.07□□□□□ -0.16
Ebf3O08791 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.07□□□□□ -0.16
Ebf3O08791 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Ebf3O08791 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ebf3O08791 Gm29649-201ENSMUST00000185649 419 ntBASIC14.07□□□□□ -0.16
Ebf3O08791 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.07□□□□□ -0.16
Ebf3O08791 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.07□□□□□ -0.16
Ebf3O08791 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.07□□□□□ -0.16
Ebf3O08791 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.07□□□□□ -0.16
Ebf3O08791 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Ebf3O08791 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.07□□□□□ -0.16
Ebf3O08791 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ebf3O08791 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.06□□□□□ -0.16
Ebf3O08791 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.06□□□□□ -0.16
Ebf3O08791 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.06□□□□□ -0.16
Ebf3O08791 Snora78-201ENSMUST00000158630 128 ntBASIC14.06□□□□□ -0.16
Ebf3O08791 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Gm45331-201ENSMUST00000209868 554 ntBASIC14.06□□□□□ -0.16
Ebf3O08791 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.06□□□□□ -0.16
Ebf3O08791 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ebf3O08791 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.06□□□□□ -0.16
Ebf3O08791 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf3O08791 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf3O08791 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Gm17420-201ENSMUST00000164753 153 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm29127-201ENSMUST00000188304 517 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm37424-201ENSMUST00000191727 561 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Gm42693-201ENSMUST00000196779 631 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm10478-201ENSMUST00000084451 396 ntBASIC14.05□□□□□ -0.16
Ebf3O08791 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf3O08791 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ebf3O08791 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf3O08791 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ebf3O08791 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ebf3O08791 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ebf3O08791 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ebf3O08791 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.04□□□□□ -0.16
Ebf3O08791 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms