Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trim55G3X8Y1 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trim55G3X8Y1 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trim55G3X8Y1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim55G3X8Y1 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms