Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm12201-201ENSMUST00000120657 1234 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm22334-201ENSMUST00000158070 133 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm45186-201ENSMUST00000206874 478 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm18212-201ENSMUST00000211678 889 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm19208-201ENSMUST00000213861 912 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm16372-201ENSMUST00000073088 450 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm3756-201ENSMUST00000169182 1355 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NpcdF8VQB8 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.24■□□□□ 0.19
NpcdF8VQB8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm24830-201ENSMUST00000102024 166 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm25890-201ENSMUST00000177643 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm22614-201ENSMUST00000178300 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.23■□□□□ 0.19
NpcdF8VQB8 AU022133-201ENSMUST00000200601 873 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm22042-201ENSMUST00000082989 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm26232-201ENSMUST00000083360 166 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm24136-201ENSMUST00000083374 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Gm26110-201ENSMUST00000083971 165 ntBASIC16.23■□□□□ 0.19
NpcdF8VQB8 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
NpcdF8VQB8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.22■□□□□ 0.19
NpcdF8VQB8 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gm11591-201ENSMUST00000120063 702 ntBASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
NpcdF8VQB8 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NpcdF8VQB8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms