Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Gm12502-201ENSMUST00000120197 444 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Gm9507-202ENSMUST00000180157 654 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Gm37852-201ENSMUST00000193027 350 ntBASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.16□□□□□ -0.3
Col6a3E9PWQ3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm5555-201ENSMUST00000120352 1111 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm4482-201ENSMUST00000200876 742 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Trav11n-201ENSMUST00000200113 343 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Col6a3E9PWQ3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Col6a3E9PWQ3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm13019-201ENSMUST00000120000 276 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm12516-201ENSMUST00000120819 385 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm3329-201ENSMUST00000159873 556 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm23771-201ENSMUST00000178702 110 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm5852-201ENSMUST00000194119 1021 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Col6a3E9PWQ3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms