Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Hfm1D3Z4R1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 n-R5s14-201ENSMUST00000122688 107 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Mir1943-201ENSMUST00000158276 73 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Gm45224-201ENSMUST00000208203 414 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Gm43908-201ENSMUST00000205074 1472 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Gm20426-201ENSMUST00000173657 440 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Gm5904-201ENSMUST00000210286 865 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 AC131330.1-201ENSMUST00000227814 1015 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Gm22058-201ENSMUST00000083393 310 ntBASIC18.66■□□□□ 0.58
Hfm1D3Z4R1 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 CU062626.3-201ENSMUST00000225522 1411 ntBASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Gm13996-201ENSMUST00000118456 430 ntBASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Gm44100-201ENSMUST00000204329 436 ntBASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Hfm1D3Z4R1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hfm1D3Z4R1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
Hfm1D3Z4R1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Hfm1D3Z4R1 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Hfm1D3Z4R1 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Gm37827-201ENSMUST00000194486 1542 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Gm43273-201ENSMUST00000199649 2594 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 AC113031.8-201ENSMUST00000227856 631 ntBASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Hfm1D3Z4R1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms