Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Gm3543D3Z235 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gm6912-201ENSMUST00000117218 544 ntBASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gm12091-201ENSMUST00000146791 830 ntBASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gm18905-201ENSMUST00000205454 928 ntBASIC12.27□□□□□ -0.45
Gm3543D3Z235 Gm45668-201ENSMUST00000211271 493 ntBASIC12.27□□□□□ -0.45
Gm3543D3Z235 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.27□□□□□ -0.45
Gm3543D3Z235 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.27□□□□□ -0.45
Gm3543D3Z235 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Gm3543D3Z235 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm12490-201ENSMUST00000120255 560 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm6745-201ENSMUST00000199216 526 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm5279-201ENSMUST00000199575 745 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm18041-201ENSMUST00000218210 618 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Gm18624-201ENSMUST00000220966 658 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC12.26□□□□□ -0.45
Gm3543D3Z235 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.26□□□□□ -0.45
Gm3543D3Z235 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.25□□□□□ -0.45
Gm3543D3Z235 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Gm3543D3Z235 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms