Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm10268-201ENSMUST00000085340 555 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm15770-201ENSMUST00000117498 584 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm25927-201ENSMUST00000175058 117 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm6222-202ENSMUST00000182143 629 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm24447-201ENSMUST00000083977 338 ntBASIC12.12□□□□□ -0.47
Shank1D3YZU1 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Shank1D3YZU1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm12403-201ENSMUST00000121384 959 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm14381-201ENSMUST00000122105 414 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm27320-201ENSMUST00000184892 109 ntBASIC12.11□□□□□ -0.47
Shank1D3YZU1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shank1D3YZU1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.1□□□□□ -0.47
Shank1D3YZU1 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms