Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm8652-201ENSMUST00000181363 964 ntBASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm27839-201ENSMUST00000184242 106 ntBASIC18.28■□□□□ 0.52
Tmf1B9EKI3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm10012-201ENSMUST00000078252 192 ntBASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Tmf1B9EKI3 Gm2420-202ENSMUST00000202224 2249 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gm43273-201ENSMUST00000199649 2594 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gm11425-201ENSMUST00000119608 498 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gm27486-201ENSMUST00000184923 80 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gm42929-201ENSMUST00000198374 1286 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Gm9396-201ENSMUST00000076703 567 ntBASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tmf1B9EKI3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tmf1B9EKI3 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tmf1B9EKI3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tmf1B9EKI3 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Tmf1B9EKI3 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Gm44799-201ENSMUST00000207639 1202 ntBASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Tmed9-203ENSMUST00000224741 1450 ntBASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tmf1B9EKI3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Gm5303-201ENSMUST00000117943 1252 ntBASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Gm24196-201ENSMUST00000179161 110 ntBASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tmf1B9EKI3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms