Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm24589-201ENSMUST00000116692 94 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm29310-201ENSMUST00000185468 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21825-201ENSMUST00000185728 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm29109-201ENSMUST00000185895 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21896-201ENSMUST00000186520 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21873-201ENSMUST00000186728 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21794-201ENSMUST00000187056 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21880-201ENSMUST00000187275 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21826-201ENSMUST00000187451 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21198-201ENSMUST00000188393 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21749-201ENSMUST00000189343 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21901-201ENSMUST00000189568 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm29424-201ENSMUST00000189716 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm28599-201ENSMUST00000189838 694 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21867-201ENSMUST00000189917 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm29269-201ENSMUST00000190087 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21722-201ENSMUST00000190153 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm28423-201ENSMUST00000190701 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21899-201ENSMUST00000190745 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21910-201ENSMUST00000191163 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21849-201ENSMUST00000191571 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm28678-201ENSMUST00000191593 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm20910-201ENSMUST00000193268 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Gm21871-201ENSMUST00000194621 696 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Umpk-ps-201ENSMUST00000211897 827 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 AC131187.1-201ENSMUST00000224567 809 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Gm12887B1AVM1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 AC159196.2-201ENSMUST00000224082 1622 ntBASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Gm13823-201ENSMUST00000119930 345 ntBASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 BC001981-202ENSMUST00000191393 1545 ntBASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Gm12887B1AVM1 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms