Protein–RNA interactions for Protein: B1AR17

Chd3, Chromodomain helicase DNA-binding protein 3, mousemouse

Predictions only

Length 2,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3B1AR17 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Chd3B1AR17 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd3B1AR17 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd3B1AR17 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Chd3B1AR17 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd3B1AR17 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Chd3B1AR17 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm4271-201ENSMUST00000174444 973 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.23□□□□□ -0.29
Chd3B1AR17 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd3B1AR17 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.23□□□□□ -0.29
Chd3B1AR17 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Chd3B1AR17 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.23□□□□□ -0.29
Chd3B1AR17 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.22□□□□□ -0.29
Chd3B1AR17 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm16372-201ENSMUST00000073088 450 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Chd3B1AR17 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Mir686-201ENSMUST00000102174 109 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm12957-201ENSMUST00000117835 377 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm11618-201ENSMUST00000117946 267 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.22□□□□□ -0.29
Chd3B1AR17 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Gm27514-201ENSMUST00000183692 110 ntBASIC13.22□□□□□ -0.29
Chd3B1AR17 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Chd3B1AR17 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Chd3B1AR17 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.21□□□□□ -0.29
Chd3B1AR17 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Chd3B1AR17 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Chd3B1AR17 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms