Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.11□□□□□ -0.15
Scn1aA2APX8 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Scn1aA2APX8 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm37497-201ENSMUST00000195830 798 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm10146-201ENSMUST00000072739 309 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm13369-201ENSMUST00000119442 987 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm16479-201ENSMUST00000121706 932 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.1□□□□□ -0.15
Scn1aA2APX8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Scn1aA2APX8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.09□□□□□ -0.15
Scn1aA2APX8 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Gm29127-201ENSMUST00000188304 517 ntBASIC14.09□□□□□ -0.15
Scn1aA2APX8 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.09□□□□□ -0.15
Scn1aA2APX8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scn1aA2APX8 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn1aA2APX8 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Scn1aA2APX8 Gm17420-201ENSMUST00000164753 153 ntBASIC14.08□□□□□ -0.15
Scn1aA2APX8 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn1aA2APX8 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.08□□□□□ -0.15
Scn1aA2APX8 Gm37922-201ENSMUST00000195596 455 ntBASIC14.08□□□□□ -0.15
Scn1aA2APX8 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn1aA2APX8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn1aA2APX8 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scn1aA2APX8 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms