Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm25287-201ENSMUST00000103846 110 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm22918-201ENSMUST00000103855 110 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm15483-201ENSMUST00000120338 456 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm5479-201ENSMUST00000160578 435 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Mir6990-201ENSMUST00000183724 91 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Chchd1-203ENSMUST00000224633 557 ntBASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav6n-6A0A075B6B2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm4995-201ENSMUST00000117247 432 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm14042-201ENSMUST00000120139 833 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm13365-201ENSMUST00000121188 973 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm24158-201ENSMUST00000175263 71 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm17435-202ENSMUST00000212699 1998 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav6n-6A0A075B6B2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav6n-6A0A075B6B2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms