Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm13385-201ENSMUST00000121089 220 ntBASIC11.11□□□□□ -0.63
Trav18A0A075B656 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.11□□□□□ -0.63
Trav18A0A075B656 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav18A0A075B656 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm15393-201ENSMUST00000120499 219 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.1□□□□□ -0.63
Trav18A0A075B656 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav18A0A075B656 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.09□□□□□ -0.63
Trav18A0A075B656 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.09□□□□□ -0.63
Trav18A0A075B656 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.09□□□□□ -0.63
Trav18A0A075B656 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav18A0A075B656 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms