Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
PdfS4R2K0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
PdfS4R2K0 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.42□□□□□ -0.74
PdfS4R2K0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC10.41□□□□□ -0.74
PdfS4R2K0 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.41□□□□□ -0.74
PdfS4R2K0 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm25911-201ENSMUST00000157621 56 ntBASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm18737-201ENSMUST00000173594 937 ntBASIC10.41□□□□□ -0.74
PdfS4R2K0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm14371-201ENSMUST00000138925 1518 ntBASIC10.41□□□□□ -0.74
PdfS4R2K0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.41□□□□□ -0.74
PdfS4R2K0 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.41□□□□□ -0.74
PdfS4R2K0 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
PdfS4R2K0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
PdfS4R2K0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.4□□□□□ -0.74
PdfS4R2K0 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.4□□□□□ -0.74
PdfS4R2K0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.4□□□□□ -0.74
PdfS4R2K0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
PdfS4R2K0 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC10.4□□□□□ -0.74
PdfS4R2K0 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.4□□□□□ -0.74
PdfS4R2K0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
PdfS4R2K0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
PdfS4R2K0 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
PdfS4R2K0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms