Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Gm15678-201ENSMUST00000117573 960 ntBASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Gm12341-201ENSMUST00000119724 503 ntBASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Phf1Q9Z1B8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Gm5425-201ENSMUST00000214125 459 ntBASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Phf1Q9Z1B8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Phf1Q9Z1B8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms