Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Gm14057-201ENSMUST00000120631 482 ntBASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Gm9522-201ENSMUST00000182394 926 ntBASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
ClcnkaQ9WUB7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Gm6912-201ENSMUST00000117218 544 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Gm14719-201ENSMUST00000121891 340 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Auts2-212ENSMUST00000178555 309 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Gm10576-201ENSMUST00000191927 825 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Gm20445-201ENSMUST00000061905 565 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
ClcnkaQ9WUB7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.5□□□□□ -0.41
ClcnkaQ9WUB7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms