Protein–RNA interactions for Protein: Q9QZS0

Col4a3, Collagen alpha-3(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3Q9QZS0 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Col4a3Q9QZS0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Gm38241-201ENSMUST00000192641 898 ntBASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Col4a3Q9QZS0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm26185-201ENSMUST00000157692 266 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm14704-201ENSMUST00000120300 874 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm6621-201ENSMUST00000193251 772 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm38341-201ENSMUST00000195357 515 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm4768-201ENSMUST00000206199 686 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm45865-201ENSMUST00000211815 945 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Gm8227-201ENSMUST00000223306 571 ntBASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col4a3Q9QZS0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gm16379-201ENSMUST00000161469 348 ntBASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gm8762-201ENSMUST00000193486 339 ntBASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gm18935-201ENSMUST00000212692 664 ntBASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col4a3Q9QZS0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.4□□□□□ -0.1
Col4a3Q9QZS0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms