Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm13418-201ENSMUST00000119097 944 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm9726-201ENSMUST00000180321 678 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm4535-201ENSMUST00000182274 558 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm27357-201ENSMUST00000183754 135 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm10355-201ENSMUST00000097146 517 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trem1Q9JKE2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trem1Q9JKE2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trem1Q9JKE2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms