Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Gm22144-201ENSMUST00000157402 102 ntBASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Gm23771-201ENSMUST00000178702 110 ntBASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Gm43416-201ENSMUST00000201916 1015 ntBASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 AC135669.1-202ENSMUST00000216742 540 ntBASIC17.98■□□□□ 0.47
Scn4aQ9ER60 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Scn4aQ9ER60 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Gm18038-201ENSMUST00000197900 485 ntBASIC17.97■□□□□ 0.47
Scn4aQ9ER60 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Scn4aQ9ER60 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Ighv2-1-201ENSMUST00000170946 353 ntBASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Gm9061-201ENSMUST00000182707 1006 ntBASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Scn4aQ9ER60 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Scn4aQ9ER60 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scn4aQ9ER60 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Scn4aQ9ER60 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Scn4aQ9ER60 Gm12990-201ENSMUST00000120372 468 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm18159-201ENSMUST00000174516 1070 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm19680-201ENSMUST00000095050 1513 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm17831-201ENSMUST00000205579 900 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Gm9785-201ENSMUST00000062642 1006 ntBASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Scn4aQ9ER60 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4aQ9ER60 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4aQ9ER60 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Scn4aQ9ER60 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms