Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Hmgn3Q9DCB1 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Hmgn3Q9DCB1 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Hmgn3Q9DCB1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Hmgn3Q9DCB1 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Hmgn3Q9DCB1 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms