Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm13385-201ENSMUST00000121089 220 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm11745-201ENSMUST00000121669 448 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm21470-201ENSMUST00000187680 696 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm29541-201ENSMUST00000191351 678 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Ssu72Q9CY97 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Ssu72Q9CY97 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Ssu72Q9CY97 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.46□□□□□ -0.26
Ssu72Q9CY97 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ssu72Q9CY97 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Ssu72Q9CY97 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Gm15460-201ENSMUST00000118147 391 ntBASIC13.45□□□□□ -0.26
Ssu72Q9CY97 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Gm24420-201ENSMUST00000176676 59 ntBASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.45□□□□□ -0.26
Ssu72Q9CY97 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Ssu72Q9CY97 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gm15770-201ENSMUST00000117498 584 ntBASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.44□□□□□ -0.26
Ssu72Q9CY97 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.44□□□□□ -0.26
Ssu72Q9CY97 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms