Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Gm28323-201ENSMUST00000186817 2499 ntBASIC15.31■□□□□ 0.04
Chd1lQ9CXF7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Gm14140-201ENSMUST00000119999 995 ntBASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Gm21362-201ENSMUST00000194272 928 ntBASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Chd1lQ9CXF7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm2810-201ENSMUST00000118681 990 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm15459-201ENSMUST00000117405 1941 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Gm8355-201ENSMUST00000177767 1941 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.29■□□□□ 0.04
Chd1lQ9CXF7 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Mir125a-201ENSMUST00000083545 68 ntBASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Chd1lQ9CXF7 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC15.27■□□□□ 0.04
Chd1lQ9CXF7 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Chd1lQ9CXF7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms