Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Gm11543-201ENSMUST00000120758 370 ntBASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Mir497b-201ENSMUST00000093601 125 ntBASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Ddx47Q9CWX9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Gm37714-201ENSMUST00000194742 342 ntBASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 AA619741-201ENSMUST00000195095 646 ntBASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Ddx47Q9CWX9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Gm2651-201ENSMUST00000203560 838 ntBASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Gm44771-201ENSMUST00000206975 626 ntBASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Ddx47Q9CWX9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Gm15678-201ENSMUST00000117573 960 ntBASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Mir5131-201ENSMUST00000175426 93 ntBASIC13.91□□□□□ -0.18
Ddx47Q9CWX9 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms