Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.01□□□□□ -0.65
RTRAFQ9CQE8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm45242-201ENSMUST00000210666 2129 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm5939-201ENSMUST00000119613 2874 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm27196-201ENSMUST00000184787 2582 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm15173-201ENSMUST00000122049 433 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44357-201ENSMUST00000195897 142 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm19658-201ENSMUST00000196231 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44367-201ENSMUST00000196836 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44350-201ENSMUST00000197197 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44390-201ENSMUST00000197533 144 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44313-201ENSMUST00000198018 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44486-201ENSMUST00000198508 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44314-201ENSMUST00000199263 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44394-201ENSMUST00000199558 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44484-201ENSMUST00000199873 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44466-201ENSMUST00000200264 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm44359-201ENSMUST00000200671 138 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC11□□□□□ -0.65
RTRAFQ9CQE8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
RTRAFQ9CQE8 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm2272-201ENSMUST00000194903 582 ntBASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gm44719-201ENSMUST00000206404 149 ntBASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RTRAFQ9CQE8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms