Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gm7222-201ENSMUST00000117512 906 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gm12895-201ENSMUST00000122214 226 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gm6089-201ENSMUST00000197666 938 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gm13830-205ENSMUST00000201195 1155 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Syt7-205ENSMUST00000224135 1557 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Gm43677-201ENSMUST00000198098 2378 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC8.8□□□□□ -1
Rpl39lQ9CQD0 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm43134-201ENSMUST00000199434 1886 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 AA414768-201ENSMUST00000121924 1257 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm5479-201ENSMUST00000160578 435 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm16026-204ENSMUST00000162652 683 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm13233-201ENSMUST00000118760 1443 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm13244-201ENSMUST00000118855 1446 ntBASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC8.79□□□□□ -1
Rpl39lQ9CQD0 Gm5366-201ENSMUST00000215494 1338 ntBASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms