Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.51□□□□□ -0.25
Trim33Q99PP7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.51□□□□□ -0.25
Trim33Q99PP7 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trim33Q99PP7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm21854-201ENSMUST00000179901 471 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm8927-201ENSMUST00000181978 981 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm3222-201ENSMUST00000071282 990 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Trim33Q99PP7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim33Q99PP7 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.49□□□□□ -0.25
Trim33Q99PP7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.49□□□□□ -0.25
Trim33Q99PP7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.49□□□□□ -0.25
Trim33Q99PP7 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim33Q99PP7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.48□□□□□ -0.25
Trim33Q99PP7 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim33Q99PP7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms