Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Msh4Q99MT2 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.22□□□□□ -0.29
Msh4Q99MT2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.22□□□□□ -0.29
Msh4Q99MT2 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.22□□□□□ -0.29
Msh4Q99MT2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Gm42612-201ENSMUST00000197986 623 ntBASIC13.22□□□□□ -0.29
Msh4Q99MT2 Gm43170-201ENSMUST00000199827 612 ntBASIC13.22□□□□□ -0.29
Msh4Q99MT2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.22□□□□□ -0.29
Msh4Q99MT2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Msh4Q99MT2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gm12859-201ENSMUST00000117834 427 ntBASIC13.21□□□□□ -0.29
Msh4Q99MT2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gm4804-201ENSMUST00000182234 999 ntBASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gm10766-202ENSMUST00000194123 606 ntBASIC13.21□□□□□ -0.29
Msh4Q99MT2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Msh4Q99MT2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Msh4Q99MT2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.2□□□□□ -0.3
Msh4Q99MT2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.2□□□□□ -0.3
Msh4Q99MT2 Gm28760-201ENSMUST00000185995 736 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms