Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm6023-201ENSMUST00000118217 606 ntBASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm25668-201ENSMUST00000157700 129 ntBASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nkx6-1Q99MA9 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm11618-201ENSMUST00000117946 267 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm20482-202ENSMUST00000174729 825 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm43138-201ENSMUST00000199123 708 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Gm16372-201ENSMUST00000073088 450 ntBASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nkx6-1Q99MA9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm13297-201ENSMUST00000120205 934 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.68□□□□□ -0.38
Nkx6-1Q99MA9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms