Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Gm3436-201ENSMUST00000179930 840 ntBASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Gm20949-201ENSMUST00000206478 952 ntBASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Chmp1b1Q99LU0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm13223-201ENSMUST00000118609 747 ntBASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm21470-201ENSMUST00000187680 696 ntBASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Chmp1b1Q99LU0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp1b1Q99LU0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Chmp1b1Q99LU0 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm12428-201ENSMUST00000119844 727 ntBASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Mir8102-201ENSMUST00000184148 139 ntBASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Chmp1b1Q99LU0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms