Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm10434-201ENSMUST00000101158 471 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm24830-201ENSMUST00000102024 166 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm25890-201ENSMUST00000177643 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Rnu1b2-201ENSMUST00000178073 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Rnu1b1-201ENSMUST00000178250 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm22614-201ENSMUST00000178300 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm22042-201ENSMUST00000082989 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm26232-201ENSMUST00000083360 166 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm24136-201ENSMUST00000083374 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Rnu1b6-201ENSMUST00000083839 166 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm26110-201ENSMUST00000083971 165 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Gm15897-201ENSMUST00000117770 1486 ntBASIC16.64■□□□□ 0.25
RtcbQ99LF4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
RtcbQ99LF4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm14726-201ENSMUST00000120623 896 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm14017-201ENSMUST00000121934 386 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm24990-201ENSMUST00000157406 323 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm5896-201ENSMUST00000189662 1024 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm38197-201ENSMUST00000192320 2122 ntBASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
RtcbQ99LF4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Gm9445-201ENSMUST00000207454 1285 ntBASIC16.62■□□□□ 0.25
RtcbQ99LF4 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RtcbQ99LF4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms