Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.57■□□□□ 0.08
Rfc4Q99J62 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm11618-201ENSMUST00000117946 267 ntBASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Olfr284-202ENSMUST00000206647 966 ntBASIC15.57■□□□□ 0.08
Rfc4Q99J62 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm8706-201ENSMUST00000197372 1491 ntBASIC15.57■□□□□ 0.08
Rfc4Q99J62 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Rfc4Q99J62 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.56■□□□□ 0.08
Rfc4Q99J62 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Gm12241-201ENSMUST00000118330 726 ntBASIC15.56■□□□□ 0.08
Rfc4Q99J62 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Gm38341-201ENSMUST00000195357 515 ntBASIC15.56■□□□□ 0.08
Rfc4Q99J62 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc4Q99J62 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.55■□□□□ 0.08
Rfc4Q99J62 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Gm25261-201ENSMUST00000157416 134 ntBASIC15.55■□□□□ 0.08
Rfc4Q99J62 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Cts7-204ENSMUST00000225321 1257 ntBASIC15.55■□□□□ 0.08
Rfc4Q99J62 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.55■□□□□ 0.08
Rfc4Q99J62 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc4Q99J62 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms