Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb20Q91XZ9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhb20Q91XZ9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm24241-201ENSMUST00000157787 145 ntBASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 AC154361.1-201ENSMUST00000225694 745 ntBASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Prdm6-202ENSMUST00000115398 1474 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Pcdhb20Q91XZ9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm8177-201ENSMUST00000181591 1336 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm13341-201ENSMUST00000120780 672 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm21854-201ENSMUST00000179901 471 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm20574-201ENSMUST00000182867 917 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm43867-201ENSMUST00000203860 525 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 AC158142.3-201ENSMUST00000226230 675 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhb20Q91XZ9 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms