Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm18041-201ENSMUST00000218210 618 ntBASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm6218-201ENSMUST00000219812 628 ntBASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pcdhb6Q91XZ4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pcdhb6Q91XZ4 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb6Q91XZ4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms