Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Gm6912-201ENSMUST00000117218 544 ntBASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.4□□□□□ -0.26
Pcdhga4Q91XY4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Pcdhga4Q91XY4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Grk6-205ENSMUST00000224653 2976 ntBASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Gm12859-201ENSMUST00000117834 427 ntBASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Gm24420-201ENSMUST00000176676 59 ntBASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdhga4Q91XY4 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm42612-201ENSMUST00000197986 623 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm43170-201ENSMUST00000199827 612 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm18905-201ENSMUST00000205454 928 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm6218-201ENSMUST00000219812 628 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Pcdhga4Q91XY4 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms