Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdhga6Q91XY2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Gm23931-201ENSMUST00000103842 109 ntBASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdhga6Q91XY2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdhga6Q91XY2 Gm15240-201ENSMUST00000118156 720 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm15957-201ENSMUST00000118893 974 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm13612-201ENSMUST00000119276 390 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm13350-201ENSMUST00000120519 479 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm4857-201ENSMUST00000192718 785 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm43094-201ENSMUST00000196549 921 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.52□□□□□ -0.25
Pcdhga6Q91XY2 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pcdhga6Q91XY2 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms