Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Gm13385-201ENSMUST00000121089 220 ntBASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ddx41Q91VN6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Ntrk2-204ENSMUST00000224259 3049 ntBASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gm5035-201ENSMUST00000215581 927 ntBASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.56■□□□□ 0.08
Ddx41Q91VN6 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ddx41Q91VN6 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm13829-201ENSMUST00000119600 138 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.55■□□□□ 0.08
Ddx41Q91VN6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms