Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Lsm1Q8VC85 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm23935-201ENSMUST00000102303 57 ntBASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm24270-201ENSMUST00000102326 57 ntBASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm24245-201ENSMUST00000157318 57 ntBASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm6736-201ENSMUST00000166583 948 ntBASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm27430-201ENSMUST00000184585 107 ntBASIC13.03□□□□□ -0.32
Lsm1Q8VC85 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gm44333-201ENSMUST00000197168 107 ntBASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Lsm1Q8VC85 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Lsm1Q8VC85 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Gm14767-201ENSMUST00000121559 586 ntBASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Lsm1Q8VC85 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Gm15240-201ENSMUST00000118156 720 ntBASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Gm26308-201ENSMUST00000157768 69 ntBASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Gm6888-201ENSMUST00000221983 706 ntBASIC13.01□□□□□ -0.33
Lsm1Q8VC85 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms