Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Gm9727-201ENSMUST00000161387 555 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nup35Q8R4R6 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Gm5364-201ENSMUST00000216789 889 ntBASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nup35Q8R4R6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Nup35Q8R4R6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms