Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm13886-201ENSMUST00000117876 1183 ntBASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm26464-201ENSMUST00000157094 305 ntBASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm19078-201ENSMUST00000206311 727 ntBASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm3365-201ENSMUST00000216296 1480 ntBASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Atf7Q8R0S1 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Atf7Q8R0S1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm12537-201ENSMUST00000119266 1002 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm11524-201ENSMUST00000119349 807 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm12070-201ENSMUST00000119551 1002 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm12671-201ENSMUST00000119978 1002 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm13292-201ENSMUST00000120014 1000 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm12403-201ENSMUST00000121384 959 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm15376-201ENSMUST00000122258 783 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm16215-201ENSMUST00000161990 637 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm10359-201ENSMUST00000180167 1002 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm12033-201ENSMUST00000180654 1002 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm5559-201ENSMUST00000180755 1002 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm4335-201ENSMUST00000182581 1004 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm42612-201ENSMUST00000197986 623 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm43170-201ENSMUST00000199827 612 ntBASIC16■□□□□ 0.15
Atf7Q8R0S1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC16■□□□□ 0.15
Atf7Q8R0S1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16■□□□□ 0.15
Atf7Q8R0S1 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Atf7Q8R0S1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Atf7Q8R0S1 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16■□□□□ 0.15
Atf7Q8R0S1 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC16■□□□□ 0.15
Atf7Q8R0S1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
Atf7Q8R0S1 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms